Get PDB intermolecular protein contacts and interface residues | Oxford Protein Informatics Group
Large-scale discovery of protein interactions at residue resolution using co-evolution calculated from genomic sequences | Nature Communications
BindML: Software for Predicting Protein-Protein Interaction Sites using Phylogenetic Substitution Models
New Score Assesses Protein-Protein Interfaces
Identifying protein-protein interface via a novel multi-scale local sequence and structural representation | BMC Bioinformatics | Full Text
Fast Calculation of Protein–Protein Binding Free Energies Using Umbrella Sampling with a Coarse-Grained Model | Journal of Chemical Theory and Computation
SPServer: split-statistical potentials for the analysis of protein structures and protein–protein interactions | BMC Bioinformatics | Full Text
Blind tests of RNA–protein binding affinity prediction | PNAS
GitHub - maxibor/protinter: Protein interaction calculator
Assessment of protein–protein interfaces in cryo-EM derived assemblies | Nature Communications
Software for Deep Analysis of PDB Structures and Mechanism Discovery
Computational prediction of protein interfaces: A review of data driven methods - ScienceDirect
Uncovering the basis of protein-protein interaction specificity with a combinatorially complete library | eLife
Identification of direct residue contacts in protein–protein interaction by message passing | PNAS
PDF) PIC: Protein Interactions Calculator
Predicting Protein–Protein Interfaces that Bind Intrinsically Disordered Protein Regions - ScienceDirect
Protein protein interactions | PPT
AREA-AFFINITY: A Web Server for Machine Learning-Based Prediction of Protein –Protein and Antibody–Protein Antigen Binding Affinities | Journal of Chemical Information and Modeling
DNA-Protein Interaction Analysis | Illumina
Predicting Protein-Protein Interactions from Matrix-Based Protein Sequence Using Convolution Neural Network and Feature-Selective Rotation Forest | Scientific Reports
